Geum urbanum
Gurb Rosaceae Rosales

Geum urbanum

42 2n Chromosomes
Rosaceae Family
Taxonomic Classification
Kingdom Plantae Phylum Tracheophyta Class Magnoliopsida Order Rosales Family Rosaceae
Genome & Ploidy
2n
42 chromosomes
Polyploidy History (PhyloWGD)
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Species Notes
Description
Geum urbanum, also known as wood avens, herb Bennet, colewort, clove root and St. Benedict's herb, is a perennial plant in the rose family (Rosaceae), which grows in shady places in the temperate regions of Eurasia and North America.
Data source
build_pgdd_species_jsons.py
Wikipedia
View article
Image credit
{'license_short': 'CC BY-SA 4.0', 'credit_html': '<span class="int-own-work" lang="en">Own work</span>', 'artist_html': '<div class="fn value">\n<a href="//commons.wikimedia.org/wiki/User:Archaeodontosaurus" title="User:Archaeodontosaurus">Didier Descouens</a></div>', 'usage_terms': 'Creative Commons Attribution-Share Alike 4.0', 'original_source': '(MHNT) Geum urbanum - Buds and flower', 'image_page_url': 'https://commons.wikimedia.org/wiki/File:(MHNT)_Geum_urbanum_-_Buds_and_flower.jpg'}
Downloads
Protein sequences
FASTA (.pep) — amino acid sequences for all annotated genes
Gene coordinates
BED format — chromosomal positions for MCScanX input
Coding sequences
FASTA (.cds) — nucleotide CDS for Ka/Ks analysis
Gene type annotations
TSV — gene duplication classifications
CDS not in local archive — search on NCBI
Grayed items are not yet available in local archive.
Analysis Tools
Synteny & Collinearity
Evolutionary Analysis
Sequence Search
Related Literature (genome, WGD & evolution)
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