Geranium rotundifolium
Grot Geraniaceae Geraniales

Geranium rotundifolium

497 Mb Genome Size
13 Chromosomes
Chromosome Assembly Level
39.7 Mb N50
Geraniaceae Family
2023 Release Year
Taxonomic Classification
Kingdom Plantae Class Magnoliopsida Order Geraniales Family Geraniaceae
Darwin Tree of Life · drGerRotu1.1 · GCA_963920655.1 · 2023-12-25
Polyploidy History (PhyloWGD)
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Species Notes
Description
Geranium rotundifolium, is a species of annual herb in the family Geraniaceae. It is native in temperate climates across much of Europe, northern Africa, and southwestern Asia; its distribution is spreading north, in response to global warming. The species favours dry, sandy or stony habitat, including old walls, rail ballast, and building rubble, including in urban areas.
Downloads
Protein sequences
FASTA (.pep) — amino acid sequences for all annotated genes
Gene coordinates
BED format — chromosomal positions for MCScanX input
Coding sequences
FASTA (.cds) — nucleotide CDS for Ka/Ks analysis
Gene type annotations
TSV — gene duplication classifications
CDS not in local archive — search on NCBI
Grayed items are not yet available in local archive.
Analysis Tools
Synteny & Collinearity
MCScanX Dotplot Synteny Network SynVisio
Evolutionary Analysis
Ks / Riparian
Sequence Search
BLAST Locus Search
External Databases
Related Literature (genome, WGD & evolution)
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