Gossypium arboreum
Gosar Malvaceae

Gossypium arboreum

Malvaceae Family
Taxonomic Classification
Kingdom Plantae Family Malvaceae
PlantGIR · v1.0
Genome & Ploidy
Polyploidy History (PhyloWGD)
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Species Notes
Description
Gossypium arboreum, commonly called tree cotton, is a species of cotton native to India and Sri Lanka. There is evidence of its cultivation as long ago as the Indus Valley Civilisation of the Indus River for the production of cotton textiles. The shrub was included in Linnaeus's Species Plantarum published in 1753.
Data source
sync_pangenome_to_db.py
Wikipedia
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Image credit
© Wikimedia Commons — Gossypium arboreum
Downloads
Protein sequences
FASTA (.pep) — amino acid sequences for all annotated genes
Gene coordinates
BED format — chromosomal positions for MCScanX input
Coding sequences
FASTA (.cds) — nucleotide CDS for Ka/Ks analysis
Gene type annotations
TSV — gene duplication classifications
CDS not in local archive — search on NCBI
Grayed items are not yet available in local archive.
Analysis Tools
Synteny & Collinearity
MCScanX Dotplot Synteny Network SynVisio
Evolutionary Analysis
Ks / Riparian
Sequence Search
BLAST Locus Search
External Databases
Related Literature (genome, WGD & evolution)
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