Fagus sylvatica
Fsyl Fagaceae Fagales

Fagus sylvatica

484 Mb Genome Size
12 Chromosomes
Chromosome Assembly Level
37.6 Mb N50
Fagaceae Family
2024 Release Year
Taxonomic Classification
Kingdom Plantae Class Magnoliopsida Order Fagales Family Fagaceae
Darwin Tree of Life · dhFagSylv1.hap1.1 · GCA_964211995.1 · 2024-08-02
Polyploidy History (PhyloWGD)
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Species Notes
Description
Fagus sylvatica, the European beech or common beech, is a large deciduous tree in the beech family with smooth silvery-grey bark, large leaf area, and a short trunk with low branches. It is native to much of Europe, growing in humid climates.
Downloads
Protein sequences
FASTA (.pep) — amino acid sequences for all annotated genes
Gene coordinates
BED format — chromosomal positions for MCScanX input
Coding sequences
FASTA (.cds) — nucleotide CDS for Ka/Ks analysis
Gene type annotations
TSV — gene duplication classifications
CDS not in local archive — search on NCBI
Grayed items are not yet available in local archive.
Analysis Tools
Synteny & Collinearity
MCScanX Dotplot Synteny Network SynVisio
Evolutionary Analysis
Ks / Riparian
Sequence Search
BLAST Locus Search
External Databases
Related Literature (genome, WGD & evolution)
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