Fraxinus pennsylvanica
Frape Oleaceae

Fraxinus pennsylvanica

Oleaceae Family
Taxonomic Classification
Kingdom Plantae Family Oleaceae
PlantGIR · v1.4
Genome & Ploidy
Polyploidy History (PhyloWGD)
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Species Notes
Description
Fraxinus pennsylvanica, the green ash or red ash, is a species of ash native to eastern and central North America, from Nova Scotia west to southeastern Alberta and eastern Colorado, south to northern Florida, and southwest to Oklahoma and eastern Texas. It has spread and become naturalized in much of the western United States and also in Argentina and Europe, from Spain to Russia.
Data source
sync_pangenome_to_db.py
Wikipedia
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Image credit
© Wikimedia Commons — Fraxinus pennsylvanica
Downloads
Protein sequences
FASTA (.pep) — amino acid sequences for all annotated genes
Gene coordinates
BED format — chromosomal positions for MCScanX input
Coding sequences
FASTA (.cds) — nucleotide CDS for Ka/Ks analysis
Gene type annotations
TSV — gene duplication classifications
CDS not in local archive — search on NCBI
Grayed items are not yet available in local archive.
Analysis Tools
Synteny & Collinearity
MCScanX Dotplot Synteny Network SynVisio
Evolutionary Analysis
Ks / Riparian
Sequence Search
BLAST Locus Search
External Databases
Related Literature (genome, WGD & evolution)
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