Flaveria trinervia
Flatr Asteraceae

Flaveria trinervia

Asteraceae Family
Taxonomic Classification
Kingdom Plantae Family Asteraceae
PlantGIR · v1.0
Genome & Ploidy
Polyploidy History (PhyloWGD)
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Species Notes
Description
Flaveria trinervia is a species of flowering plant in the family Asteraceae known by the common names clustered yellowtops, speedyweed, and yellow twinstem. It is native to parts of the Americas, including the southeastern and southwestern United States, most of the Bahamas, Mexico, Belize, and parts of the Caribbean, especially Cuba, Cayman Islands, Jamaica, Hispaniola, Puerto Rico and Barbados. It is also known in many other places as an introduced species and often a noxious weed, such as in Hawaii.
Data source
sync_pangenome_to_db.py
Wikipedia
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Image credit
© Wikimedia Commons — Flaveria trinervia
Downloads
Protein sequences
FASTA (.pep) — amino acid sequences for all annotated genes
Gene coordinates
BED format — chromosomal positions for MCScanX input
Coding sequences
FASTA (.cds) — nucleotide CDS for Ka/Ks analysis
Gene type annotations
TSV — gene duplication classifications
CDS not in local archive — search on NCBI
Grayed items are not yet available in local archive.
Analysis Tools
Synteny & Collinearity
MCScanX Dotplot Synteny Network SynVisio
Evolutionary Analysis
Ks / Riparian
Sequence Search
BLAST Locus Search
External Databases
Related Literature (genome, WGD & evolution)
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