Fagus crenata
Fcre Fagaceae Fagales

Fagus crenata

Fagus crenata

Fagaceae Family
Taxonomic Classification
Kingdom Plantae Class Magnoliopsida Order Fagales Family Fagaceae
Polyploidy History (PhyloWGD)
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Species Notes
Common name(s)
Fagus crenata
Description
Fagus crenata, buna , known as Siebold's beech, or Japanese beech, is a species of deciduous tree in the family Fagaceae. It is a tall dense hardwood that is only native to Japan. The first written record of this tree in the Western world was in 1830 and it was scientifically described in 1851.
Downloads
Protein sequences
FASTA (.pep) — amino acid sequences for all annotated genes
Gene coordinates
BED format — chromosomal positions for MCScanX input
Coding sequences
FASTA (.cds) — nucleotide CDS for Ka/Ks analysis
Gene type annotations
TSV — gene duplication classifications
CDS not in local archive — search on NCBI
Grayed items are not yet available in local archive.
Analysis Tools
Synteny & Collinearity
MCScanX Dotplot Synteny Network SynVisio
Evolutionary Analysis
Ks / Riparian
Sequence Search
BLAST Locus Search
External Databases
Related Literature (genome, WGD & evolution)
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