Fagus grandifolia
Faga Fagaceae Fagales

Fagus grandifolia

Fagaceae Family
Taxonomic Classification
Kingdom Plantae Class Magnoliopsida Order Fagales Family Fagaceae
TreeGenes · v1.0
Genome & Ploidy
Polyploidy History (PhyloWGD)
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Species Notes
Description
Fagus grandifolia, the American beech or North American beech, is a species of tree growing to 16–35 meters tall. It is one of two beech species native to North America, the other occurring in Mexico. It flourished over most of the continent prior to the last ice age, but is now limited to the east.
Data source
sync_pangenome_to_db.py
Wikipedia
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Image credit
© Wikimedia Commons — Fagus grandifolia
Downloads
Protein sequences
FASTA (.pep) — amino acid sequences for all annotated genes
Gene coordinates
BED format — chromosomal positions for MCScanX input
Coding sequences
FASTA (.cds) — nucleotide CDS for Ka/Ks analysis
Gene type annotations
TSV — gene duplication classifications
CDS not in local archive — search on NCBI
Grayed items are not yet available in local archive.
Analysis Tools
Synteny & Collinearity
MCScanX Dotplot Synteny Network SynVisio
Evolutionary Analysis
Ks / Riparian
Sequence Search
BLAST Locus Search
External Databases
Related Literature (genome, WGD & evolution)
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