Eutrema salsugineum
Eutsa Brassicaceae Brassicales

Eutrema salsugineum

Brassicaceae Family
Taxonomic Classification
Kingdom Plantae Class Magnoliopsida Order Brassicales Family Brassicaceae
PlantGIR · v1.0
Genome & Ploidy
Polyploidy History (PhyloWGD)
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Species Notes
Description
Eutrema salsugineum, the saltwater cress or salt-lick mustard, is a species of flowering plant in the family Brassicaceae. A petite annual or biennial, it is native to Central Asia, Siberia, Mongolia, northern and eastern China, northwestern and western Canada, Montana and Colorado in the United States, and Nuevo León in Mexico. An extremophile halophyte, it is a close relative of the model organism Arabidopsis thaliana and has been adopted to study salt, drought, and cold stress resistance in plants, including having its genome sequenced.
Data source
sync_pangenome_to_db.py
Wikipedia
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Image credit
GBIF
Downloads
Protein sequences
FASTA (.pep) — amino acid sequences for all annotated genes
Gene coordinates
BED format — chromosomal positions for MCScanX input
Coding sequences
FASTA (.cds) — nucleotide CDS for Ka/Ks analysis
Gene type annotations
TSV — gene duplication classifications
CDS not in local archive — search on NCBI
Grayed items are not yet available in local archive.
Analysis Tools
Synteny & Collinearity
MCScanX Dotplot Synteny Network SynVisio
Evolutionary Analysis
Ks / Riparian
Sequence Search
BLAST Locus Search
External Databases
Related Literature (genome, WGD & evolution)
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