Echinochloa oryzicola
Eory Poaceae Poales

Echinochloa oryzicola

Echinochloa oryzicola

Poaceae Family
Taxonomic Classification
Kingdom Plantae Class Liliopsida Order Poales Family Poaceae
Polyploidy History (PhyloWGD)
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Species Notes
Common name(s)
Echinochloa oryzicola
Description
Echinochloa oryzicola, also called late watergrass or echinochloa phyllopogon, is an annual species of monocot grass that grows in temperate climates. It is native to East Asia, and is found in China, Korea, Japan and the Russian Far East near Vladivostok. It has been introduced into Europe, in Belgium, France, Germany, Italy, Portugal and Spain, and also the Transcaucasus.
Downloads
Protein sequences
FASTA (.pep) — amino acid sequences for all annotated genes
Gene coordinates
BED format — chromosomal positions for MCScanX input
Coding sequences
FASTA (.cds) — nucleotide CDS for Ka/Ks analysis
Gene type annotations
TSV — gene duplication classifications
CDS not in local archive — search on NCBI
Grayed items are not yet available in local archive.
Analysis Tools
Synteny & Collinearity
MCScanX Dotplot Synteny Network SynVisio
Evolutionary Analysis
Ks / Riparian
Sequence Search
BLAST Locus Search
External Databases
Related Literature (genome, WGD & evolution)
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