Euphrasia
Econ Orobanchaceae Lamiales

Euphrasia

976 Mb Genome Size
22 Chromosomes
Chromosome Assembly Level
41.3 Mb N50
Orobanchaceae Family
2023 Release Year
Taxonomic Classification
Kingdom Plantae Class Magnoliopsida Order Lamiales Family Orobanchaceae
Darwin Tree of Life · daEupConf1.1 · GCA_954870475.1 · 2023-07-15
Polyploidy History (PhyloWGD)
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Species Notes
Description
Euphrasia, or eyebright, is a genus of about 215 species of herbaceous flowering plants in the family Orobanchaceae, with a cosmopolitan distribution. They are hemiparasitic on grasses and other plants. Both the common and generic names refer to the plant's use in a lotion for treating eye infections, with Euphrasia literally meaning 'good-cheer'.
Downloads
Protein sequences
FASTA (.pep) — amino acid sequences for all annotated genes
Gene coordinates
BED format — chromosomal positions for MCScanX input
Coding sequences
FASTA (.cds) — nucleotide CDS for Ka/Ks analysis
Gene type annotations
TSV — gene duplication classifications
CDS not in local archive — search on NCBI
Grayed items are not yet available in local archive.
Analysis Tools
Synteny & Collinearity
MCScanX Dotplot Synteny Network SynVisio
Evolutionary Analysis
Ks / Riparian
Sequence Search
BLAST Locus Search
External Databases
Related Literature (genome, WGD & evolution)
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