Dioscorea cayenensis subsp. rotundata
Drot2 Dioscoreaceae Dioscoreales

Dioscorea cayenensis subsp. rotundata

Dioscoreaceae Family
Taxonomic Classification
Kingdom Plantae Class Liliopsida Order Dioscoreales Family Dioscoreaceae
Ensembl Plants · GCA_009730915.1
Polyploidy History (PhyloWGD)
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Species Notes
Description
Dioscorea cayenensis subsp. rotundata, commonly known as the white yam, West African yam, Guinea yam, or white ñame, is a subspecies of yam native to Africa. It is one of the most important cultivated yams.
Wikipedia
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Image credit
© Wikimedia Commons — Dioscorea cayenensis subsp. rotundata
Downloads
Protein sequences
FASTA (.pep) — amino acid sequences for all annotated genes
Gene coordinates
BED format — chromosomal positions for MCScanX input
Coding sequences
FASTA (.cds) — nucleotide CDS for Ka/Ks analysis
Gene type annotations
TSV — gene duplication classifications
CDS not in local archive — search on NCBI
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Analysis Tools
Synteny & Collinearity
MCScanX Dotplot Synteny Network SynVisio
Evolutionary Analysis
Ks / Riparian
Sequence Search
BLAST Locus Search
External Databases
Related Literature (genome, WGD & evolution)
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