Dianthus caryophyllus
Diaca Caryophyllaceae

Dianthus caryophyllus

Caryophyllaceae Family
Taxonomic Classification
Kingdom Plantae Family Caryophyllaceae
PlantGIR · v1.0
Genome & Ploidy
Polyploidy History (PhyloWGD)
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Species Notes
Description
Dianthus caryophyllus, commonly known as carnation or clove pink, is a species of Dianthus native to the Mediterranean region. While its exact natural range is uncertain due to extensive cultivation over the last 2,000 years, wild carnations are most common in the Mediterranean region. Carnations are prized for their wide variety of colors, delicate fringed petals, and fragrance, often described as spicy, clove-like, or reminiscent of a combination of cinnamon and nutmeg, hence the common name "clove pink".
Data source
sync_pangenome_to_db.py
Wikipedia
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Image credit
© Wikimedia Commons — Dianthus caryophyllus
Downloads
Protein sequences
FASTA (.pep) — amino acid sequences for all annotated genes
Gene coordinates
BED format — chromosomal positions for MCScanX input
Coding sequences
FASTA (.cds) — nucleotide CDS for Ka/Ks analysis
Gene type annotations
TSV — gene duplication classifications
CDS not in local archive — search on NCBI
Grayed items are not yet available in local archive.
Analysis Tools
Synteny & Collinearity
MCScanX Dotplot Synteny Network SynVisio
Evolutionary Analysis
Ks / Riparian
Sequence Search
BLAST Locus Search
External Databases
Related Literature (genome, WGD & evolution)
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