Dendrobium catenatum
Denca Orchidaceae

Dendrobium catenatum

Orchidaceae Family
Taxonomic Classification
Kingdom Plantae Family Orchidaceae
PlantGIR · v2.0
Genome & Ploidy
Polyploidy History (PhyloWGD)
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Species Notes
Description
Dendrobium is a genus of mostly epiphytic and lithophytic orchids in the family Orchidaceae. It is a very large genus, containing more than 1,800 species that are found in diverse habitats throughout much of south, east and southeast Asia, including China, Japan, India, the Philippines, Indonesia, Australia, New Guinea, Vietnam and many of the islands of the Pacific. Orchids in this genus have roots that creep over the surface of trees or rocks, rarely having their roots in soil.
Data source
sync_pangenome_to_db.py
Wikipedia
View article
Image credit
© Wikimedia Commons — Dendrobium
Downloads
Protein sequences
FASTA (.pep) — amino acid sequences for all annotated genes
Gene coordinates
BED format — chromosomal positions for MCScanX input
Coding sequences
FASTA (.cds) — nucleotide CDS for Ka/Ks analysis
Gene type annotations
TSV — gene duplication classifications
CDS not in local archive — search on NCBI
Grayed items are not yet available in local archive.
Analysis Tools
Synteny & Collinearity
MCScanX Dotplot Synteny Network SynVisio
Evolutionary Analysis
Ks / Riparian
Sequence Search
BLAST Locus Search
External Databases
Related Literature (genome, WGD & evolution)
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