Daucus carota
Dauca Apiaceae

Daucus carota

Apiaceae Family
Taxonomic Classification
Kingdom Plantae Family Apiaceae
PlantGIR · TXH4
Genome & Ploidy
Polyploidy History (PhyloWGD)
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Species Notes
Description
Daucus carota, whose common names include wild carrot, European wild carrot, bird's nest, bishop's lace, carrot flower, and Queen Anne's lace, is a flowering plant in the family Apiaceae. It is native to temperate regions of the Old World with a number of regional subspecies, and is naturalised widely elsewhere. Carrots cultivated as a food crop are cultivars of the domesticated subspecies Daucus carota subsp.
Data source
sync_pangenome_to_db.py
Wikipedia
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Image credit
© Wikimedia Commons — Daucus carota
Downloads
Protein sequences
FASTA (.pep) — amino acid sequences for all annotated genes
Gene coordinates
BED format — chromosomal positions for MCScanX input
Coding sequences
FASTA (.cds) — nucleotide CDS for Ka/Ks analysis
Gene type annotations
TSV — gene duplication classifications
CDS not in local archive — search on NCBI
Grayed items are not yet available in local archive.
Analysis Tools
Synteny & Collinearity
MCScanX Dotplot Synteny Network SynVisio
Evolutionary Analysis
Ks / Riparian
Sequence Search
BLAST Locus Search
External Databases
Related Literature (genome, WGD & evolution)
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