Cucurbita moschata
Cucmo Cucurbitaceae

Cucurbita moschata

Cucurbitaceae Family
Taxonomic Classification
Kingdom Plantae Family Cucurbitaceae
PlantGIR · v1.0
Genome & Ploidy
Polyploidy History (PhyloWGD)
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Species Notes
Description
Cucurbita moschata is a species originating in the tropical Americas which is cultivated for edible flesh, flowers, greens, and seeds. It includes cultivars known in English as squash or pumpkin. Cultivars of C.
Data source
sync_pangenome_to_db.py
Wikipedia
View article
Image credit
© Wikimedia Commons — Cucurbita moschata
Downloads
Protein sequences
FASTA (.pep) — amino acid sequences for all annotated genes
Gene coordinates
BED format — chromosomal positions for MCScanX input
Coding sequences
FASTA (.cds) — nucleotide CDS for Ka/Ks analysis
Gene type annotations
TSV — gene duplication classifications
CDS not in local archive — search on NCBI
Grayed items are not yet available in local archive.
Analysis Tools
Synteny & Collinearity
MCScanX Dotplot Synteny Network SynVisio
Evolutionary Analysis
Ks / Riparian
Sequence Search
BLAST Locus Search
External Databases
Related Literature (genome, WGD & evolution)
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