Carica papaya
Cpay Caricaceae Brassicales

Carica papaya

18 2n Chromosomes
Caricaceae Family
Taxonomic Classification
Kingdom Plantae Phylum Angiosperms (Eudicots) Class Magnoliopsida Order Brassicales Family Caricaceae
Genome & Ploidy
2n
18 chromosomes
Polyploidy History (PhyloWGD)
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Species Notes
Description
The papaya, papaw, or pawpaw is the plant species Carica papaya, one of the 21 accepted species in the genus Carica of the family Caricaceae, and also the name of its fruit. It was first domesticated in Mesoamerica, within modern-day southern Mexico and Central America. It is grown in several countries in regions with a tropical climate. In 2022, India produced 38% of the world's supply of papayas.
Data source
build_pgdd_species_jsons.py
Wikipedia
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Downloads
Protein sequences
FASTA (.pep) — amino acid sequences for all annotated genes
Gene coordinates
BED format — chromosomal positions for MCScanX input
Coding sequences
FASTA (.cds) — nucleotide CDS for Ka/Ks analysis
Gene type annotations
TSV — gene duplication classifications
CDS not in local archive — search on NCBI
Grayed items are not yet available in local archive.
Analysis Tools
Synteny & Collinearity
MCScanX Dotplot Synteny Network SynVisio
Evolutionary Analysis
Ks / Riparian
Sequence Search
BLAST Locus Search
External Databases
Related Literature (genome, WGD & evolution)
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