Chamaecrista fasciculata
Chafa Fabaceae

Chamaecrista fasciculata

Fabaceae Family
Taxonomic Classification
Kingdom Plantae Family Fabaceae
PlantGIR · v1.0
Genome & Ploidy
Polyploidy History (PhyloWGD)
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Species Notes
Description
Chamaecrista fasciculata, the partridge pea, is a species of legume native to most of the eastern United States. It is an annual which grows to approximately 0.5 meters tall. It has bright yellow flowers from early summer until first frost, with flowers through the entire flowering season if rainfall is sufficient.
Data source
sync_pangenome_to_db.py
Wikipedia
View article
Image credit
© Wikimedia Commons — Chamaecrista fasciculata
Downloads
Protein sequences
FASTA (.pep) — amino acid sequences for all annotated genes
Gene coordinates
BED format — chromosomal positions for MCScanX input
Coding sequences
FASTA (.cds) — nucleotide CDS for Ka/Ks analysis
Gene type annotations
TSV — gene duplication classifications
CDS not in local archive — search on NCBI
Grayed items are not yet available in local archive.
Analysis Tools
Synteny & Collinearity
MCScanX Dotplot Synteny Network SynVisio
Evolutionary Analysis
Ks / Riparian
Sequence Search
BLAST Locus Search
External Databases
Related Literature (genome, WGD & evolution)
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