Capsicum frutescens CA254
Cfr Solanaceae Solanales

Capsicum frutescens CA254

24 2n Chromosomes
Solanaceae Family
Taxonomic Classification
Kingdom Plantae Phylum Magnoliophyta Class Magnoliopsida Order Solanales Family Solanaceae
Genome & Ploidy
2n
24 chromosomes
Polyploidy History (PhyloWGD)
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Species Notes
Description
Capsicum frutescens is a wild chili pepper that has genetic proximity to the cultivated pepper Capsicum chinense. It is native to Central and South America as well as Mexico. Pepper cultivars of C.
Data source
build_pgdd_species_jsons.py
Wikipedia
View article
Image credit
© Wikimedia Commons — Capsicum frutescens
Downloads
Protein sequences
FASTA (.pep) — amino acid sequences for all annotated genes
Gene coordinates
BED format — chromosomal positions for MCScanX input
Coding sequences
FASTA (.cds) — nucleotide CDS for Ka/Ks analysis
Gene type annotations
TSV — gene duplication classifications
CDS not in local archive — search on NCBI
Grayed items are not yet available in local archive.
Analysis Tools
Synteny & Collinearity
MCScanX Dotplot Synteny Network SynVisio
Evolutionary Analysis
Ks / Riparian
Sequence Search
BLAST Locus Search
External Databases
Related Literature (genome, WGD & evolution)
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