Ceiba pentandra
Ceipe Malvaceae

Ceiba pentandra

Malvaceae Family
Taxonomic Classification
Kingdom Plantae Family Malvaceae
PlantGIR · v1.0
Genome & Ploidy
Polyploidy History (PhyloWGD)
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Species Notes
Description
Ceiba pentandra is a tropical tree of the order Malvales and the family Malvaceae, native to Central America, the Caribbean, and the northern half of South America; some authors also consider it native in western and central Africa. It is widely introduced in other tropical regions including South and Southeast Asia, where it is cultivated.
Data source
sync_pangenome_to_db.py
Wikipedia
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Image credit
© Wikimedia Commons — Ceiba pentandra
Downloads
Protein sequences
FASTA (.pep) — amino acid sequences for all annotated genes
Gene coordinates
BED format — chromosomal positions for MCScanX input
Coding sequences
FASTA (.cds) — nucleotide CDS for Ka/Ks analysis
Gene type annotations
TSV — gene duplication classifications
CDS not in local archive — search on NCBI
Grayed items are not yet available in local archive.
Analysis Tools
Synteny & Collinearity
MCScanX Dotplot Synteny Network SynVisio
Evolutionary Analysis
Ks / Riparian
Sequence Search
BLAST Locus Search
External Databases
Related Literature (genome, WGD & evolution)
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