Climacium dendroides
Cden2 Climaciaceae Hypnales

Climacium dendroides

Climacium dendroides

413 Mb Genome Size
11 Chromosomes
Chromosome Assembly Level
33.5 Mb N50
Climaciaceae Family
2023 Release Year
Taxonomic Classification
Kingdom Plantae Class Bryopsida Order Hypnales Family Climaciaceae
Darwin Tree of Life · cbCliDend2.1 · GCA_950106755.1 · 2023-05-01
Polyploidy History (PhyloWGD)
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Species Notes
Common name(s)
Climacium dendroides
Description
Climacium dendroides, also known as tree climacium moss, belongs in the order Hypnales and family Climaciaceae, in class Bryopsida and subclass Bryidae. It is identified as a "tree moss" due to its distinctive morphological features, and has four species identified across the Northern Hemisphere. The species name "dendroides" describes the tree-like morphology of the plant, and its genus name came from the structure of the perforations of peristome teeth.
Downloads
Protein sequences
FASTA (.pep) — amino acid sequences for all annotated genes
Gene coordinates
BED format — chromosomal positions for MCScanX input
Coding sequences
FASTA (.cds) — nucleotide CDS for Ka/Ks analysis
Gene type annotations
TSV — gene duplication classifications
CDS not in local archive — search on NCBI
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Analysis Tools
Synteny & Collinearity
MCScanX Dotplot Synteny Network SynVisio
Evolutionary Analysis
Ks / Riparian
Sequence Search
BLAST Locus Search
External Databases
Related Literature (genome, WGD & evolution)
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