Castanea dentata
Cden Fagaceae Fagales

Castanea dentata

Castanea dentata

Fagaceae Family
Taxonomic Classification
Kingdom Plantae Class Magnoliopsida Order Fagales Family Fagaceae
Polyploidy History (PhyloWGD)
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Species Notes
Common name(s)
Castanea dentata
Description
The American chestnut is a large, fast-growing deciduous tree of the beech family native to eastern North America. As is true of all species in the genus Castanea, the American chestnut produces burred fruit with edible nuts. The American chestnut was once common in the Appalachian Mountain range and was a dominant species in the oak-chestnut forest region of its central and southern range.
Wikipedia
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Image credit
Jamie Myslik · © Jamie Myslik · CC BY-NC
Downloads
Protein sequences
FASTA (.pep) — amino acid sequences for all annotated genes
Gene coordinates
BED format — chromosomal positions for MCScanX input
Coding sequences
FASTA (.cds) — nucleotide CDS for Ka/Ks analysis
Gene type annotations
TSV — gene duplication classifications
CDS not in local archive — search on NCBI
Grayed items are not yet available in local archive.
Analysis Tools
Synteny & Collinearity
MCScanX Dotplot Synteny Network SynVisio
Evolutionary Analysis
Ks / Riparian
Sequence Search
BLAST Locus Search
External Databases
Related Literature (genome, WGD & evolution)
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