Carex scoparia
Carsc Cyperaceae

Carex scoparia

Cyperaceae Family
Taxonomic Classification
Kingdom Plantae Family Cyperaceae
PlantGIR · v1.0
Genome & Ploidy
Polyploidy History (PhyloWGD)
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Species Notes
Description
Carex scoparia is a species of sedge known by the common names broom sedge and pointed broom sedge. It should not be confused with the unrelated grass species known as "broom sedge," Andropogon virginicus.
Data source
sync_pangenome_to_db.py
Wikipedia
View article
Image credit
© Wikimedia Commons — Carex scoparia
Downloads
Protein sequences
FASTA (.pep) — amino acid sequences for all annotated genes
Gene coordinates
BED format — chromosomal positions for MCScanX input
Coding sequences
FASTA (.cds) — nucleotide CDS for Ka/Ks analysis
Gene type annotations
TSV — gene duplication classifications
CDS not in local archive — search on NCBI
Grayed items are not yet available in local archive.
Analysis Tools
Synteny & Collinearity
MCScanX Dotplot Synteny Network SynVisio
Evolutionary Analysis
Ks / Riparian
Sequence Search
BLAST Locus Search
External Databases
Related Literature (genome, WGD & evolution)
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