Capsicum annuum
Can Solanaceae Solanales

Capsicum annuum

24 2n Chromosomes
Solanaceae Family
Taxonomic Classification
Kingdom Plantae Phylum Magnoliophyta Class Magnoliopsida Order Solanales Family Solanaceae
Genome & Ploidy
2n
24 chromosomes
Polyploidy History (PhyloWGD)
Browse all →
Loading…
Species Notes
Description
Capsicum annuum is a flowering plant in the family Solanaceae (nightshades), native to the northern regions of South America and to southwestern North America. The plant produces berries of many colors including red, green, and yellow, often with pungent taste. It is one of the oldest cultivated crops, with domestication dating back to around 6,000 years ago in regions of Mexico. The genus Capsicum has over 30 species but Capsicum annuum is the primary species in its genus, as it has been widely cultivated for human consumption for a substantial amount of time and has spread across the world. This species has many uses in culinary, medicine, self-defense, and ornamental applications.
Data source
build_pgdd_species_jsons.py
Wikipedia
View article
Image credit
GBIF
Downloads
Protein sequences
FASTA (.pep) — amino acid sequences for all annotated genes
Gene coordinates
BED format — chromosomal positions for MCScanX input
Coding sequences
FASTA (.cds) — nucleotide CDS for Ka/Ks analysis
Gene type annotations
TSV — gene duplication classifications
CDS not in local archive — search on NCBI
Grayed items are not yet available in local archive.
Analysis Tools
Synteny & Collinearity
MCScanX Dotplot Synteny Network SynVisio
Evolutionary Analysis
Ks / Riparian
Sequence Search
BLAST Locus Search
External Databases
Related Literature (genome, WGD & evolution)
Searching PubMed…
Back to genome list