Asparagus officinalis
Aspof Asparagaceae Asparagales

Asparagus officinalis

Asparagaceae Family
Taxonomic Classification
Kingdom Plantae Class Liliopsida Order Asparagales Family Asparagaceae
PlantGIR · v1.1
Genome & Ploidy
Polyploidy History (PhyloWGD)
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Species Notes
Description
Asparagus or garden asparagus is a perennial flowering plant species in the genus Asparagus native to Eurasia. Widely cultivated as a vegetable crop, its young shoots are used as a spring vegetable.
Data source
sync_pangenome_to_db.py
Wikipedia
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Image credit
Link Davis · © Link Davis · CC BY-NC
Downloads
Protein sequences
FASTA (.pep) — amino acid sequences for all annotated genes
Gene coordinates
BED format — chromosomal positions for MCScanX input
Coding sequences
FASTA (.cds) — nucleotide CDS for Ka/Ks analysis
Gene type annotations
TSV — gene duplication classifications
CDS not in local archive — search on NCBI
Grayed items are not yet available in local archive.
Analysis Tools
Synteny & Collinearity
MCScanX Dotplot Synteny Network SynVisio
Evolutionary Analysis
Ks / Riparian
Sequence Search
BLAST Locus Search
External Databases
Related Literature (genome, WGD & evolution)
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