Anoectochilus roxburghii
Anoc Orchidaceae Asparagales

Anoectochilus roxburghii

15.6 Mb N50
Orchidaceae Family
Taxonomic Classification
Kingdom Plantae Class Liliopsida Order Asparagales Family Orchidaceae
TreeGenes · v0.9
Genome & Ploidy
Polyploidy History (PhyloWGD)
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Species Notes
Description
Anoectochilus, commonly known as marbled jewel orchids or filigree orchids, is a genus of about fifty species in the orchid family Orchidaceae. They are terrestrial herbs with a creeping rhizome, an upright flowering stem and dark coloured leaves with contrasting veins. The flowers are relatively large and have a large labellum, markedly different from the sepals and petals.
Data source
sync_pangenome_to_db.py
Wikipedia
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Image credit
© Wikimedia Commons — Anoectochilus
Downloads
Protein sequences
FASTA (.pep) — amino acid sequences for all annotated genes
Gene coordinates
BED format — chromosomal positions for MCScanX input
Coding sequences
FASTA (.cds) — nucleotide CDS for Ka/Ks analysis
Gene type annotations
TSV — gene duplication classifications
CDS not in local archive — search on NCBI
Grayed items are not yet available in local archive.
Analysis Tools
Synteny & Collinearity
MCScanX Dotplot Synteny Network SynVisio
Evolutionary Analysis
Ks / Riparian
Sequence Search
BLAST Locus Search
External Databases
Related Literature (genome, WGD & evolution)
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