Anbu Poaceae Poales

Andropogon burmanicus

Poaceae Family
Taxonomic Classification
Kingdom Plantae Phylum Tracheophyta Class Liliopsida Order Poales Family Poaceae Subfamily Panicoideae Tribe Andropogoneae
Genome & Ploidy
Polyploidy History (PhyloWGD)
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Species Notes
Description
Andropogon burmanicus is a grass species in the tribe Andropogoneae (family Poaceae). Genome assembly and annotation from the PanAnd / MaizeGDB consortium (Preprint: doi:10.1101/2025.01.22.633974).
Data source
build_pgdd_species_jsons.py
Sources
https://doi.org/10.1101/2025.01.22.633974
Downloads
Protein sequences
FASTA (.pep) — amino acid sequences for all annotated genes
Gene coordinates
BED format — chromosomal positions for MCScanX input
Coding sequences
FASTA (.cds) — nucleotide CDS for Ka/Ks analysis
Gene type annotations
TSV — gene duplication classifications
CDS not in local archive — search on NCBI
Grayed items are not yet available in local archive.
Analysis Tools
Synteny & Collinearity
MCScanX Dotplot Synteny Network SynVisio
Evolutionary Analysis
Ks / Riparian
Sequence Search
BLAST Locus Search
External Databases
Related Literature (genome, WGD & evolution)
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