Amaranthus cruentus
Amacr Amaranthaceae

Amaranthus cruentus

Amaranthaceae Family
Taxonomic Classification
Kingdom Plantae Family Amaranthaceae
PlantGIR · v1.0
Genome & Ploidy
Polyploidy History (PhyloWGD)
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Species Notes
Description
Amaranthus cruentus is a flowering plant species that is native from Central Mexico to Nicaragua. It yields a nutritious staple amaranth grain, being one of three Amaranthus species cultivated as a grain source, the other two being Amaranthus hypochondriacus and Amaranthus caudatus. It has several common names, including blood amaranth, red amaranth, purple amaranth, prince's feather, and Mexican grain amaranth.
Data source
sync_pangenome_to_db.py
Wikipedia
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Image credit
© Wikimedia Commons — Amaranthus cruentus
Downloads
Protein sequences
FASTA (.pep) — amino acid sequences for all annotated genes
Gene coordinates
BED format — chromosomal positions for MCScanX input
Coding sequences
FASTA (.cds) — nucleotide CDS for Ka/Ks analysis
Gene type annotations
TSV — gene duplication classifications
CDS not in local archive — search on NCBI
Grayed items are not yet available in local archive.
Analysis Tools
Synteny & Collinearity
MCScanX Dotplot Synteny Network SynVisio
Evolutionary Analysis
Ks / Riparian
Sequence Search
BLAST Locus Search
External Databases
Related Literature (genome, WGD & evolution)
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