Abies nordmanniana
Aene Pinaceae Pinales

Abies nordmanniana

33.4 Mb N50
Pinaceae Family
Taxonomic Classification
Kingdom Plantae Class Pinopsida Order Pinales Family Pinaceae
TreeGenes · v2.0
Genome & Ploidy
Polyploidy History (PhyloWGD)
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Species Notes
Description
Abies nordmanniana, the Nordmann fir or Caucasian fir, is a fir indigenous to the mountains south and east of the Black Sea, in Turkey, Georgia and the Russian Caucasus. It occurs at elevations of 900–2,200 m on mountains with precipitation of over 1,000 mm.
Data source
sync_pangenome_to_db.py
Wikipedia
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Image credit
© Wikimedia Commons — Abies nordmanniana
Downloads
Protein sequences
FASTA (.pep) — amino acid sequences for all annotated genes
Gene coordinates
BED format — chromosomal positions for MCScanX input
Coding sequences
FASTA (.cds) — nucleotide CDS for Ka/Ks analysis
Gene type annotations
TSV — gene duplication classifications
CDS not in local archive — search on NCBI
Grayed items are not yet available in local archive.
Analysis Tools
Synteny & Collinearity
MCScanX Dotplot Synteny Network SynVisio
Evolutionary Analysis
Ks / Riparian
Sequence Search
BLAST Locus Search
External Databases
Related Literature (genome, WGD & evolution)
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