Alopecurus aequalis
Aaeq Poaceae Poales

Alopecurus aequalis

Poaceae Family
Taxonomic Classification
Kingdom Plantae Class Liliopsida Order Poales Family Poaceae
Polyploidy History (PhyloWGD)
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Species Notes
Description
Alopecurus aequalis is a common species of grass known as shortawn foxtail or orange foxtail. It is native to much of the temperate Northern Hemisphere from Eurasia to North America. It is most commonly found in areas near fresh water, such as the margins of ponds and ditches.
Downloads
Protein sequences
FASTA (.pep) — amino acid sequences for all annotated genes
Gene coordinates
BED format — chromosomal positions for MCScanX input
Coding sequences
FASTA (.cds) — nucleotide CDS for Ka/Ks analysis
Gene type annotations
TSV — gene duplication classifications
CDS not in local archive — search on NCBI
Grayed items are not yet available in local archive.
Analysis Tools
Synteny & Collinearity
MCScanX Dotplot Synteny Network SynVisio
Evolutionary Analysis
Ks / Riparian
Sequence Search
BLAST Locus Search
External Databases
Related Literature (genome, WGD & evolution)
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