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Obtain a report of related syntenic regions in multiple species by locus identifier
You can choose e.g. AT1G25460, GRMZM2G000039 ppa005930m



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All intra/cross-species blocks for AT4G25530, graphs and tables display ±100kb region. Blue arrows are other anchor genes in the region, red is query locus.

[1] AT4G25530 is contained in a large block (Score 1669.0, E-value 3e-19) with 46 anchors
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Order within BlockLocus 1Annotation 1Locus 2Annotation 2KaKs
32AT4G25440AT5G519800.080.77
33AT4G25470AT5G519900.231.57
34AT4G25500AT5G520400.170.88
35AT4G25530AT5G521700.450.91
36AT4G25560AT5G522600.290.73
37AT4G25580AT5G523000.421.21
38AT4G25590AT5G523600.050.95
39AT4G25620AT5G524300.191.00
40AT4G25630AT5G524700.050.87


[2] AT4G25530 is contained in a huge block (Score 23260.0, E-value 1e-110) with 588 anchors
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Order within BlockLocus 1Annotation 1Locus 2Annotation 2KaKs
404AT4G25420Brara.A015380.080.41
405AT4G25433Brara.A015400.160.46
406AT4G25434Brara.A015410.070.44
407AT4G25440Brara.A015420.060.48
408AT4G25500Brara.A015430.040.45
409AT4G25515Brara.A015450.120.43
410AT4G25530Brara.A015460.430.56
411AT4G25550Brara.A015480.020.37
412AT4G25560Brara.A015490.120.30
413AT4G25570Brara.A015500.150.58
414AT4G25590Brara.A015510.030.40
415AT4G25600Brara.A015520.090.34
416AT4G25610Brara.A015530.100.34
417AT4G25620Brara.A015540.120.71
418AT4G25630Brara.A015550.070.54
419AT4G25650Brara.A015580.080.62
420AT4G25660Brara.A015590.070.46
421AT4G25670Brara.A015600.070.38
422AT4G25672Brara.A015610.120.31
423AT4G25700Brara.A015660.060.55
424AT4G25720Brara.A015670.150.47
425AT4G25740Brara.A015680.040.31
426AT4G25750Brara.A015690.070.51
427AT4G25760Brara.A015700.110.78
428AT4G25770Brara.A015710.070.36
429AT4G25780Brara.A015720.170.31


[3] AT4G25530 is contained in a small block (Score 288.0, E-value 2e-80) with 8 anchors
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Order within BlockLocus 1Annotation 1Locus 2Annotation 2KaKs
7AT4G25515Glyma.16G1982000.352.41
8AT4G25530Glyma.16G1967000.561.60


[4] AT4G25530 is contained in a small block (Score 318.0, E-value 2e-59) with 9 anchors
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Order within BlockLocus 1Annotation 1Locus 2Annotation 2KaKs
9AT4G25530Glyma.09G1437000.551.66


[5] AT4G25530 is contained in a large block (Score 385.0, E-value 4e-113) with 11 anchors
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Order within BlockLocus 1Annotation 1Locus 2Annotation 2KaKs
8AT4G25530Solyc06g035940.20.000.00


[6] AT4G25530 is contained in a large block (Score 536.0, E-value 2e-19) with 15 anchors
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Order within BlockLocus 1Annotation 1Locus 2Annotation 2KaKs
11AT4G25530Bo9g1048800.491.16


[7] AT4G25530 is contained in a huge block (Score 62616.0, E-value 0.0) with 1577 anchors
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Order within BlockLocus 1Annotation 1Locus 2Annotation 2KaKs
795AT4G25315Carubv10005888m0.050.23
796AT4G25320Carubv10004935m0.050.24
797AT4G25330Carubv10007779m0.110.53
798AT4G25340Carubv10004742m0.090.23
799AT4G25370Carubv10006894m0.040.20
800AT4G25390Carubv10004364m0.040.38
801AT4G25400Carubv10006739m0.521.70
802AT4G25420Carubv10005014m0.040.33
803AT4G25430Carubv10007552m0.160.21
804AT4G25433Carubv10006055m0.050.28
805AT4G25434Carubv10005436m0.050.30
806AT4G25440Carubv10004856m0.010.31
807AT4G25450Carubv10007834m0.030.26
808AT4G25500Carubv10006724m0.010.26
809AT4G25515Carubv10004216m0.050.30
810AT4G25530Carubv10007084m0.220.30
811AT4G25540Carubv10004012m0.060.22
812AT4G25550Carubv10005772m0.010.21
813AT4G25560Carubv10007732m0.080.21
814AT4G25570Carubv10005631m0.030.21
815AT4G25580Carubv10007046m0.090.41
816AT4G25620Carubv10004810m0.060.38
817AT4G25630Carubv10005269m0.030.32
818AT4G25650Carubv10006566m0.040.26
819AT4G25660Carubv10005569m0.030.34
820AT4G25670Carubv10006395m0.090.42
821AT4G25700Carubv10005328m0.050.35
822AT4G25720Carubv10005281m0.060.21
823AT4G25730Carubv10004151m0.050.25
824AT4G25740Carubv10005747m0.030.25
825AT4G25750Carubv10004458m0.040.24
826AT4G25760Carubv10007397m0.090.34
827AT4G25770Carubv10004970m0.040.23



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