Locus Search

Obtain a report of related syntenic regions in multiple species by locus identifier
You can choose e.g. AT1G25460, GRMZM2G000039 ppa005930m



Display range :

All intra/cross-species blocks for AT2G17723, graphs and tables display ±100kb region. Blue arrows are other anchor genes in the region, red is query locus.

[1] AT2G17723 is contained in a huge block (Score 5784.0, E-value 2e-26) with 146 anchors
Export to pdf
Order within BlockLocus 1Annotation 1Locus 2Annotation 2KaKs
6016063788AT2G175400.060.19
6116042858AT2G175500.010.14
6216034710AT2G175600.030.11
6316049586AT2G175700.040.14
6416055326AT2G175800.040.11
6516063617AT2G175900.450.63
6616055832AT2G176300.010.17
6716044231AT2G176400.010.15
6816034808AT2G176600.010.20
6916042175AT2G176700.020.19
7016060698AT2G176800.040.17
7116047771AT2G176950.020.15
7216055408AT2G177000.010.12
7316044282AT2G177050.010.16
7416061454AT2G177100.020.13
7516049325AT2G177230.080.26
7616059826AT2G177300.040.20
7716038457AT2G177700.110.18
7816043083AT2G177800.030.11
7916040236AT2G177870.070.17
8016049481AT2G177900.010.07
8116053043AT2G178200.030.12
8216062187AT2G178300.120.17
8316038128AT2G178400.010.18
8416043546AT2G178450.070.14
8516062577AT2G178500.070.15
8616057174AT2G178600.040.18
8716034477AT2G178700.050.20
8816038111AT2G178800.050.16


[2] AT2G17723 is contained in a huge block (Score 14874.0, E-value 3e-48) with 377 anchors
Export to pdf
Order within BlockLocus 1Annotation 1Locus 2Annotation 2KaKs
157AT2G17520Carubv10013065m0.060.27
158AT2G17525Carubv10013206m0.050.27
159AT2G17540Carubv10014165m0.120.38
160AT2G17550Carubv10015639m0.030.24
161AT2G17560Carubv10014808m0.040.25
162AT2G17570Carubv10014285m0.050.26
163AT2G17580Carubv10016083m0.070.18
164AT2G17630Carubv10015128m0.020.28
165AT2G17660Carubv10015429m0.030.29
166AT2G17670Carubv10015998m0.080.35
167AT2G17680Carubv10015728m0.060.26
168AT2G17695Carubv10014585m0.020.28
169AT2G17705Carubv10015544m0.030.32
170AT2G17710Carubv10016361m0.030.19
171AT2G17723Carubv10015727m0.140.71
172AT2G17730Carubv10014482m0.050.30
173AT2G17750Carubv10015449m0.120.53
174AT2G17760Carubv10016111m0.030.18
175AT2G17770Carubv10015985m0.130.55
176AT2G17780Carubv10013809m0.100.27
177AT2G17787Carubv10014159m0.090.22
178AT2G17790Carubv10015897m0.030.23
179AT2G17820Carubv10012835m0.020.23
180AT2G17840Carubv10013699m0.030.33
181AT2G17845Carubv10015813m0.060.35
182AT2G17850Carubv10016479m0.100.26
183AT2G17870Carubv10015336m0.060.29
184AT2G17880Carubv10015866m0.090.34
185AT2G17900Carubv10013566m0.040.20
186AT2G17930Carubv10012791m0.010.19



 Print this page