Plant Dataset

NameCDS*PEP*BED*
Arabidopsis lyrata (Lyrate rockcress)al.cds.gzal.pep.gzal.bed.gz
Actinidia chinensis (Kiwifruit)ah.cds.gzah.pep.gzah.bed.gz
Arabidopsis thaliana (Arabidopsis)at.cds.gzat.pep.gzat.bed.gz
Amborella trichopoda (Amborella)ar.cds.gzar.pep.gzar.bed.gz
Brachypodium distachyon (Purple false brome)bd.cds.gzbd.pep.gzbd.bed.gz
Brassica oleracea (Kale)bo.cds.gzbo.pep.gzbo.bed.gz
Brassica rapa (Chinese cabbage)br.cds.gzbr.pep.gzbr.bed.gz
Beta vulgaris (Sugar beet)bv.cds.gzbv.pep.gzbv.bed.gz
Cicer arietinum (Chickpea)ca.cds.gzca.pep.gzca.bed.gz
Capsella rubella (Capsella)cb.cds.gzcb.pep.gzcb.bed.gz
Cajanus cajan (Pigeonpea)cc.cds.gzcc.pep.gzcc.bed.gz
Citrus sinensis (Sweet orange)ci.cds.gzci.pep.gzci.bed.gz
Citrullus lanatus (Watermelon)cl.cds.gzcl.pep.gzcl.bed.gz
Carica papaya (Papaya)cp.cds.gzcp.pep.gzcp.bed.gz
Chlamydomonas reinhardtii (Green algae)cr.cds.gzcr.pep.gzcr.bed.gz
Cucumis sativus (Cucumber)cs.cds.gzcs.pep.gzcs.bed.gz
Capsicum annuum (Hot pepper)cu.cds.gzcu.pep.gzcu.bed.gz
Eucalyptus grandis (Eucalyptus)eg.cds.gzeg.pep.gzeg.bed.gz
Elaeis guineensis (Oil palm)el.cds.gzel.pep.gzel.bed.gz
Fragaria vesca (Strawberry)fv.cds.gzfv.pep.gzfv.bed.gz
Glycine max (Soybean)gm.cds.gzgm.pep.gzgm.bed.gz
Gossypium raimondii (Cotton)gr.cds.gzgr.pep.gzgr.bed.gz
Hordeum vulgare (Barley)hv.cds.gzhv.pep.gzhv.bed.gz
Lotus japonicus (Lotus)lj.cds.gzlj.pep.gzlj.bed.gz
Musa acuminata (Banana)ma.cds.gzma.pep.gzma.bed.gz
Malus x domestica (Apple)md.cds.gzmd.pep.gzmd.bed.gz
Medicago truncatula (Barrel medic)mt.cds.gzmt.pep.gzmt.bed.gz
Nelumbo nucifera (Sacred lotus)nn.cds.gznn.pep.gznn.bed.gz
Oryza sativa (Rice)os.cds.gzos.pep.gzos.bed.gz
Picea abies (Norway spruce)pa.cds.gzpa.pep.gzpa.bed.gz
Pyrus bretschneideri (Pear)pb.cds.gzpb.pep.gzpb.bed.gz
Phalaenopsis equestris (Orchid)pe.cds.gzpe.pep.gzpe.bed.gz
Physcomitrella patens (Moss)ph.cds.gzph.pep.gzph.bed.gz
Prunus mume (Mei)pm.cds.gzpm.pep.gzpm.bed.gz
Prunus persica (Peach)pp.cds.gzpp.pep.gzpp.bed.gz
Populus trichocarpa (Western poplar)pt.cds.gzpt.pep.gzpt.bed.gz
Phaseolus vulgaris (Common bean)pv.cds.gzpv.pep.gzpv.bed.gz
Ricinus communis (Castor bean)rc.cds.gzrc.pep.gzrc.bed.gz
Sorghum bicolor (Sorghum)sb.cds.gzsb.pep.gzsb.bed.gz
Solanum tuberosum (Potato)st.cds.gzst.pep.gzst.bed.gz
Solanum lycopersicum (Tomato)sl.cds.gzsl.pep.gzsl.bed.gz
Selaginella moellendorffii (Selaginella)sm.cds.gzsm.pep.gzsm.bed.gz
Theobroma cacao (Cacao)ta.cds.gzta.pep.gzta.bed.gz
Triticum urartu (Wheat A-genome)tu.cds.gztu.pep.gztu.bed.gz
Utricularia gibba (Humped bladderwort)ug.cds.gzug.pep.gzug.bed.gz
Vitis vinifera (Grape vine)vv.cds.gzvv.pep.gzvv.bed.gz
Zea mays (Maize)zm.cds.gzzm.pep.gzzm.bed.gz
* CDS: Coding sequences (FASTA format), PEP: Protein sequences (FASTA format), BED: Positions on the scaffolds (Scaffold, gene, start, stop)

* These datasets represent processed annotations for various plant genomes (see Data Source table)